![](https://github.com/aphalo/ggpp/raw/HEAD/man/figures/logo.png)
ggpp - Grammar Extensions to 'ggplot2'
Extensions to 'ggplot2' respecting the grammar of graphics paradigm. Geometries: geom_table(), geom_plot() and geom_grob() add insets to plots using native data coordinates, while geom_table_npc(), geom_plot_npc() and geom_grob_npc() do the same using "npc" coordinates through new aesthetics "npcx" and "npcy". Statistics: select observations based on 2D density. Positions: radial nudging away from a center point and nudging away from a line or curve; combined stacking and nudging; combined dodging and nudging.
Last updated 27 days ago
data-labelsdatavizggplot2-enhancementsggplot2-geomsggplot2-insetsggplot2-positions
117 stars 5.68 score 40 dependencies 24 dependents![](https://github.com/aphalo/ggpmisc/raw/HEAD/man/figures/logo.png)
ggpmisc - Miscellaneous Extensions to 'ggplot2'
Extensions to 'ggplot2' respecting the grammar of graphics paradigm. Statistics: locate and tag peaks and valleys; label plot with the equation of a fitted polynomial or other types of models; labels with P-value, R^2 or adjusted R^2 or information criteria for fitted models; label with ANOVA table for fitted models; label with summary for fitted models. Model fit classes for which suitable methods are provided by package 'broom' and 'broom.mixed' are supported. Scales and stats to build volcano and quadrant plots based on outcomes, fold changes, p-values and false discovery rates.
Last updated 26 days ago
data-analysisdatavizggplot2-annotationsggplot2-statsstatistics
89 stars 5.52 score 57 dependencies 13 dependents![](https://github.com/aphalo/photobiology/raw/HEAD/man/figures/logo.png)
photobiology - Photobiological Calculations
Definitions of classes, methods, operators and functions for use in photobiology and radiation meteorology and climatology. Calculation of effective (weighted) and not-weighted irradiances/doses, fluence rates, transmittance, reflectance, absorptance, absorbance and diverse ratios and other derived quantities from spectral data. Local maxima and minima: peaks, valleys and spikes. Conversion between energy-and photon-based units. Wavelength interpolation. Astronomical calculations related solar angles and day length. Colours and vision. This package is part of the 'r4photobiology' suite, Aphalo, P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Last updated 4 months ago
lightphotobiologyquantificationr4photobiology-suiteradiationspectrasun-position
3 stars 3.03 score 29 dependencies 11 dependents![](https://github.com/aphalo/gginnards/raw/HEAD/man/figures/logo.png)
gginnards - Explore the Innards of 'ggplot2' Objects
Extensions to 'ggplot2' providing low-level debug tools: statistics and geometries echoing their data argument. Layer manipulation: deletion, insertion, extraction and reordering of layers. Deletion of unused variables from the data object embedded in "ggplot" objects.
Last updated 26 days ago
datavizdebuggingggplot2-enhancementesggplot2-layer-manipulationinspection
23 stars 2.60 score 30 dependencies 2 dependents![](https://github.com/aphalo/ggspectra/raw/HEAD/man/figures/logo.png)
ggspectra - Extensions to 'ggplot2' for Radiation Spectra
Additional annotations, stats, geoms and scales for plotting "light" spectra with 'ggplot2', together with specializations of ggplot() and autoplot() methods for spectral data and waveband definitions stored in objects of classes defined in package 'photobiology'. Part of the 'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Last updated 18 days ago
datavizggplot2-autoplotggplot2-enhancementesggplot2-geomsggplot2-scalesggplot2-statslightr4photobiology-suiteradiationspectra
5 stars 2.07 score 46 dependencies 1 dependents![](https://github.com/aphalo/photobiologyWavebands/raw/HEAD/man/figures/logo.png)
photobiologyWavebands - Waveband Definitions for UV, VIS, and IR Radiation
Constructors of waveband objects for commonly used biological spectral weighting functions (BSWFs) and for different wavebands describing named ranges of wavelengths in the ultraviolet (UV), visible (VIS) and infrared (IR) regions of the electromagnetic spectrum. Part of the 'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Last updated 6 days ago
1 stars 1.66 score 30 dependencies 3 dependents![](https://github.com/aphalo/photobiologyInOut/raw/HEAD/man/figures/logo.png)
photobiologyInOut - Read Spectral and Logged Data from Foreign Files
Functions for reading, and in some cases writing, foreign files containing spectral data from spectrometers and their associated software, output from daylight simulation models in common use, and some spectral data repositories. As well as functions for exchange of spectral data with other R packages. Part of the 'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Last updated 7 days ago
1.60 score 47 dependencies 1 dependents![](https://github.com/aphalo/ooacquire/raw/HEAD/man/figures/logo.png)
ooacquire - Acquire Data from OO Spectrometers
Functions to acquire data directly from Ocean Optics spectrometers, and functions to read similar data from files. Functions to convert raw-counts into counts-per-second and physical quantities. Data are saved in objects of classes defined in package 'photobiology'. The instrument settings, instrument description, date-time of acquisition and optionally goecode are stored as attributes.
Last updated 21 days ago
data-acquisitiondata-importr4photobiologyspectra
1.51 score 66 dependencies![](https://github.com/aphalo/photobiologyLEDs/raw/HEAD/man/figures/logo.png)
photobiologyLEDs - Spectral Data for Light-Emitting-Diodes
Spectral emission data for some frequently used light emitting diodes available as electronic components. Part of the 'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Last updated 4 months ago
2 stars 1.25 score 30 dependencies![](https://github.com/aphalo/photobiologySun/raw/HEAD/man/figures/logo.png)
photobiologySun - Data for Sunlight Spectra
Data for the extraterrestrial solar spectral irradiance and ground level solar spectral irradiance and irradiance. In addition data for shade light under vegetation and irradiance time series from different broadband sensors. Part of the 'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Last updated 4 months ago
1.18 score 30 dependencies![](https://github.com/aphalo/photobiologyPlants/raw/HEAD/man/figures/logo.png)
photobiologyPlants - Plant Photobiology Related Functions and Data
Provides functions for quantifying visible (VIS) and ultraviolet (UV) radiation in relation to the photoreceptors Phytochromes, Cryptochromes, and UVR8 which are present in plants. It also includes data sets on the optical properties of plants. Part of the 'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Last updated 4 months ago
1.02 score 31 dependencies![](https://github.com/aphalo/learnrbook-pkg/raw/HEAD/man/figures/logo.png)
learnrbook - Datasets and Code Examples from P. J. Aphalo's "Learn R" Book
Data, scripts and code from chunks used as examples in the book "Learn R: As a Language" 1ed and 2ed by Pedro J. Aphalo. ISBN 9780367182533 (pbk 1ed); ISBN 9780367182557 (hbk 1ed); ISBN 9780429060342 (ebk 1ed).
Last updated 1 months ago
book
1 stars 0.96 score 0 dependencies![](https://github.com/aphalo/rOmniDriver/raw/HEAD/man/figures/logo.png)
rOmniDriver - Omni Driver R wrapper
This package is a wrapper of the OmniDriver java driver for Ocean Optics spectrometers.
Last updated 4 months ago
data-acquisitionspectroscopy
0.23 score 1 dependencies